Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.29■□□□□ 0.68
VTNP04004 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
VTNP04004 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
VTNP04004 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.29■□□□□ 0.68
VTNP04004 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.29■□□□□ 0.68
VTNP04004 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.29■□□□□ 0.68
VTNP04004 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.29■□□□□ 0.68
VTNP04004 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTNP04004 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.28■□□□□ 0.68
VTNP04004 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
VTNP04004 NCF1C-201ENST00000438382 1427 ntBASIC19.28■□□□□ 0.68
VTNP04004 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 KRT18P3-201ENST00000451602 1288 ntBASIC19.28■□□□□ 0.68
VTNP04004 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.28■□□□□ 0.68
VTNP04004 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.28■□□□□ 0.68
VTNP04004 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.28■□□□□ 0.68
VTNP04004 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.28■□□□□ 0.68
VTNP04004 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.28■□□□□ 0.68
VTNP04004 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
VTNP04004 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.28■□□□□ 0.68
VTNP04004 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VTNP04004 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.28■□□□□ 0.68
VTNP04004 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.28■□□□□ 0.68
VTNP04004 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VTNP04004 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.28■□□□□ 0.68
VTNP04004 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VTNP04004 AC009336.1-201ENST00000608941 1553 ntBASIC19.27■□□□□ 0.68
VTNP04004 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VTNP04004 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VTNP04004 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.27■□□□□ 0.68
VTNP04004 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.27■□□□□ 0.68
VTNP04004 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.27■□□□□ 0.68
VTNP04004 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
VTNP04004 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VTNP04004 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.27■□□□□ 0.68
VTNP04004 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VTNP04004 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VTNP04004 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
VTNP04004 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VTNP04004 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VTNP04004 BX842568.4-201ENST00000421222 227 ntBASIC19.27■□□□□ 0.68
VTNP04004 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.27■□□□□ 0.68
VTNP04004 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
VTNP04004 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.27■□□□□ 0.68
VTNP04004 AC002558.1-201ENST00000488906 803 ntBASIC19.27■□□□□ 0.68
VTNP04004 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VTNP04004 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.27■□□□□ 0.68
VTNP04004 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.27■□□□□ 0.68
VTNP04004 AC139530.3-201ENST00000620344 690 ntBASIC19.27■□□□□ 0.68
VTNP04004 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
VTNP04004 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.27■□□□□ 0.68
VTNP04004 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VTNP04004 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VTNP04004 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
VTNP04004 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
VTNP04004 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
VTNP04004 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VTNP04004 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
VTNP04004 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.27■□□□□ 0.67
VTNP04004 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.27■□□□□ 0.67
VTNP04004 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VTNP04004 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
VTNP04004 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VTNP04004 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
VTNP04004 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.26■□□□□ 0.67
VTNP04004 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.26■□□□□ 0.67
VTNP04004 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.26■□□□□ 0.67
VTNP04004 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
VTNP04004 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
VTNP04004 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.26■□□□□ 0.67
VTNP04004 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VTNP04004 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.26■□□□□ 0.67
VTNP04004 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.26■□□□□ 0.67
VTNP04004 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms