Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.03■□□□□ 0.32
SEC22BO75396 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.03■□□□□ 0.32
SEC22BO75396 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SEC22BO75396 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.03■□□□□ 0.32
SEC22BO75396 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.03■□□□□ 0.32
SEC22BO75396 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.03■□□□□ 0.32
SEC22BO75396 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.03■□□□□ 0.32
SEC22BO75396 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.03■□□□□ 0.32
SEC22BO75396 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.03■□□□□ 0.32
SEC22BO75396 AC073912.3-201ENST00000624414 853 ntBASIC17.03■□□□□ 0.32
SEC22BO75396 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.03■□□□□ 0.32
SEC22BO75396 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SEC22BO75396 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.02■□□□□ 0.32
SEC22BO75396 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SEC22BO75396 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.02■□□□□ 0.32
SEC22BO75396 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.02■□□□□ 0.32
SEC22BO75396 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.02■□□□□ 0.32
SEC22BO75396 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.02■□□□□ 0.32
SEC22BO75396 IGHGP-201ENST00000390555 1178 ntBASIC17.02■□□□□ 0.32
SEC22BO75396 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.02■□□□□ 0.32
SEC22BO75396 AC117947.1-201ENST00000427448 529 ntBASIC17.02■□□□□ 0.32
SEC22BO75396 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.02■□□□□ 0.32
SEC22BO75396 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.02■□□□□ 0.32
SEC22BO75396 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.02■□□□□ 0.32
SEC22BO75396 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SEC22BO75396 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.02■□□□□ 0.32
SEC22BO75396 AC012306.2-201ENST00000609350 630 ntBASIC17.02■□□□□ 0.32
SEC22BO75396 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SEC22BO75396 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SEC22BO75396 AC097493.4-201ENST00000641197 219 ntBASIC17.02■□□□□ 0.32
SEC22BO75396 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC22BO75396 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SEC22BO75396 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.02■□□□□ 0.31
SEC22BO75396 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
SEC22BO75396 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SEC22BO75396 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SEC22BO75396 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SEC22BO75396 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.02■□□□□ 0.31
SEC22BO75396 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SEC22BO75396 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SEC22BO75396 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.01■□□□□ 0.31
SEC22BO75396 BX276092.7-203ENST00000637198 1536 ntBASIC17.01■□□□□ 0.31
SEC22BO75396 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.01■□□□□ 0.31
SEC22BO75396 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SEC22BO75396 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SEC22BO75396 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SEC22BO75396 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.01■□□□□ 0.31
SEC22BO75396 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.01■□□□□ 0.31
SEC22BO75396 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.01■□□□□ 0.31
SEC22BO75396 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.01■□□□□ 0.31
SEC22BO75396 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.01■□□□□ 0.31
SEC22BO75396 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SEC22BO75396 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 AL353692.3-201ENST00000407031 1396 ntBASIC17.01■□□□□ 0.31
SEC22BO75396 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SEC22BO75396 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17■□□□□ 0.31
SEC22BO75396 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17■□□□□ 0.31
SEC22BO75396 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SEC22BO75396 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SEC22BO75396 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SEC22BO75396 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms