Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 HEIH-201ENST00000623091 1652 ntBASIC15.76■□□□□ 0.11
PFDN1O60925 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PFDN1O60925 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.76■□□□□ 0.11
PFDN1O60925 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.76■□□□□ 0.11
PFDN1O60925 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.76■□□□□ 0.11
PFDN1O60925 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.76■□□□□ 0.11
PFDN1O60925 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.76■□□□□ 0.11
PFDN1O60925 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.76■□□□□ 0.11
PFDN1O60925 AL356652.1-201ENST00000615962 565 ntBASIC15.76■□□□□ 0.11
PFDN1O60925 MIR6724-1-201ENST00000616420 92 ntBASIC15.76■□□□□ 0.11
PFDN1O60925 MIR6724-2-201ENST00000616483 92 ntBASIC15.76■□□□□ 0.11
PFDN1O60925 MIR6724-4-201ENST00000617390 92 ntBASIC15.76■□□□□ 0.11
PFDN1O60925 MIR6724-3-201ENST00000622482 92 ntBASIC15.76■□□□□ 0.11
PFDN1O60925 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.76■□□□□ 0.11
PFDN1O60925 KRT18P55-202ENST00000578578 1546 ntBASIC15.76■□□□□ 0.11
PFDN1O60925 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.76■□□□□ 0.11
PFDN1O60925 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 MYO15B-237ENST00000642007 4893 ntBASIC15.76■□□□□ 0.11
PFDN1O60925 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PFDN1O60925 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PFDN1O60925 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.76■□□□□ 0.11
PFDN1O60925 KRT16P2-201ENST00000414673 1423 ntBASIC15.76■□□□□ 0.11
PFDN1O60925 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.76■□□□□ 0.11
PFDN1O60925 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.75■□□□□ 0.11
PFDN1O60925 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.75■□□□□ 0.11
PFDN1O60925 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.75■□□□□ 0.11
PFDN1O60925 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
PFDN1O60925 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.75■□□□□ 0.11
PFDN1O60925 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PFDN1O60925 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.75■□□□□ 0.11
PFDN1O60925 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.75■□□□□ 0.11
PFDN1O60925 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.75■□□□□ 0.11
PFDN1O60925 MIR4787-201ENST00000607364 84 ntBASIC15.75■□□□□ 0.11
PFDN1O60925 AC120498.10-201ENST00000621827 505 ntBASIC15.75■□□□□ 0.11
PFDN1O60925 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.75■□□□□ 0.11
PFDN1O60925 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PFDN1O60925 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
PFDN1O60925 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.75■□□□□ 0.11
PFDN1O60925 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 AC138969.2-201ENST00000532739 9932 ntBASIC15.75■□□□□ 0.11
PFDN1O60925 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PFDN1O60925 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
PFDN1O60925 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PFDN1O60925 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PFDN1O60925 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PFDN1O60925 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN1O60925 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN1O60925 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN1O60925 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.74■□□□□ 0.11
PFDN1O60925 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN1O60925 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 AC007322.3-201ENST00000426526 701 ntBASIC15.74■□□□□ 0.11
PFDN1O60925 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PFDN1O60925 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.74■□□□□ 0.11
PFDN1O60925 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PFDN1O60925 PCDHA3-202ENST00000532566 4594 ntBASIC15.74■□□□□ 0.11
PFDN1O60925 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN1O60925 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.74■□□□□ 0.11
PFDN1O60925 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PFDN1O60925 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms