Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.53■□□□□ 0.24
HCN1O60741 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.53■□□□□ 0.24
HCN1O60741 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HCN1O60741 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HCN1O60741 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 AC012317.2-201ENST00000623305 2251 ntBASIC16.52■□□□□ 0.24
HCN1O60741 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HCN1O60741 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HCN1O60741 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.52■□□□□ 0.24
HCN1O60741 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.52■□□□□ 0.24
HCN1O60741 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.52■□□□□ 0.24
HCN1O60741 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HCN1O60741 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.52■□□□□ 0.24
HCN1O60741 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.52■□□□□ 0.24
HCN1O60741 TPSP2-201ENST00000561760 610 ntBASIC16.52■□□□□ 0.24
HCN1O60741 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.52■□□□□ 0.24
HCN1O60741 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.52■□□□□ 0.24
HCN1O60741 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
HCN1O60741 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.52■□□□□ 0.23
HCN1O60741 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCN1O60741 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HCN1O60741 AC099343.3-201ENST00000605834 2503 ntBASIC16.52■□□□□ 0.23
HCN1O60741 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.52■□□□□ 0.23
HCN1O60741 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.52■□□□□ 0.23
HCN1O60741 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HCN1O60741 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HCN1O60741 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCN1O60741 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.52■□□□□ 0.23
HCN1O60741 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.51■□□□□ 0.23
HCN1O60741 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HCN1O60741 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 PCDHA12-202ENST00000613593 2588 ntBASIC16.51■□□□□ 0.23
HCN1O60741 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HCN1O60741 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.51■□□□□ 0.23
HCN1O60741 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
HCN1O60741 TPM4P1-201ENST00000436100 807 ntBASIC16.51■□□□□ 0.23
HCN1O60741 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HCN1O60741 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.51■□□□□ 0.23
HCN1O60741 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.51■□□□□ 0.23
HCN1O60741 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.51■□□□□ 0.23
HCN1O60741 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.51■□□□□ 0.23
HCN1O60741 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 AC093010.1-201ENST00000473625 1624 ntBASIC16.51■□□□□ 0.23
HCN1O60741 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.51■□□□□ 0.23
HCN1O60741 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.51■□□□□ 0.23
HCN1O60741 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HCN1O60741 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HCN1O60741 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCN1O60741 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
HCN1O60741 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.5■□□□□ 0.23
HCN1O60741 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms