Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 KRT18P28-201ENST00000453838 1332 ntBASIC20.53■□□□□ 0.88
CTNND1O60716 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.53■□□□□ 0.88
CTNND1O60716 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNND1O60716 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTNND1O60716 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNND1O60716 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNND1O60716 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.53■□□□□ 0.88
CTNND1O60716 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNND1O60716 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.53■□□□□ 0.88
CTNND1O60716 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTNND1O60716 AP002414.1-201ENST00000391405 1147 ntBASIC20.53■□□□□ 0.88
CTNND1O60716 PTCHD3P3-201ENST00000403073 906 ntBASIC20.53■□□□□ 0.88
CTNND1O60716 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.53■□□□□ 0.88
CTNND1O60716 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.53■□□□□ 0.88
CTNND1O60716 HTR5BP-201ENST00000430851 1154 ntBASIC20.53■□□□□ 0.88
CTNND1O60716 AC002558.1-201ENST00000488906 803 ntBASIC20.53■□□□□ 0.88
CTNND1O60716 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.53■□□□□ 0.88
CTNND1O60716 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CTNND1O60716 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.53■□□□□ 0.88
CTNND1O60716 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.53■□□□□ 0.88
CTNND1O60716 AL353135.1-201ENST00000606729 504 ntBASIC20.53■□□□□ 0.88
CTNND1O60716 GGTLC5P-201ENST00000617623 998 ntBASIC20.53■□□□□ 0.88
CTNND1O60716 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CTNND1O60716 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.53■□□□□ 0.88
CTNND1O60716 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.53■□□□□ 0.88
CTNND1O60716 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.53■□□□□ 0.88
CTNND1O60716 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.53■□□□□ 0.88
CTNND1O60716 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
CTNND1O60716 WIZP1-201ENST00000531444 2299 ntBASIC20.53■□□□□ 0.88
CTNND1O60716 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNND1O60716 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CTNND1O60716 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CTNND1O60716 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.53■□□□□ 0.88
CTNND1O60716 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.52■□□□□ 0.88
CTNND1O60716 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNND1O60716 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.52■□□□□ 0.88
CTNND1O60716 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTNND1O60716 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTNND1O60716 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTNND1O60716 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CTNND1O60716 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.52■□□□□ 0.88
CTNND1O60716 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNND1O60716 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CTNND1O60716 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTNND1O60716 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CTNND1O60716 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.52■□□□□ 0.88
CTNND1O60716 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.52■□□□□ 0.88
CTNND1O60716 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.52■□□□□ 0.88
CTNND1O60716 SNHG9-202ENST00000564014 471 ntBASIC20.52■□□□□ 0.88
CTNND1O60716 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.52■□□□□ 0.88
CTNND1O60716 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.52■□□□□ 0.88
CTNND1O60716 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.52■□□□□ 0.88
CTNND1O60716 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTNND1O60716 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTNND1O60716 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNND1O60716 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.52■□□□□ 0.87
CTNND1O60716 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTNND1O60716 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTNND1O60716 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
CTNND1O60716 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTNND1O60716 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.51■□□□□ 0.87
CTNND1O60716 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.51■□□□□ 0.87
CTNND1O60716 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.51■□□□□ 0.87
CTNND1O60716 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CTNND1O60716 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.51■□□□□ 0.87
CTNND1O60716 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CTNND1O60716 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CTNND1O60716 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.51■□□□□ 0.87
CTNND1O60716 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.51■□□□□ 0.87
CTNND1O60716 AC096734.2-201ENST00000562054 433 ntBASIC20.51■□□□□ 0.87
CTNND1O60716 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.51■□□□□ 0.87
CTNND1O60716 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CTNND1O60716 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
CTNND1O60716 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.51■□□□□ 0.87
CTNND1O60716 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.51■□□□□ 0.87
CTNND1O60716 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTNND1O60716 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNND1O60716 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNND1O60716 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNND1O60716 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNND1O60716 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CTNND1O60716 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTNND1O60716 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms