Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VEGFDO43915 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VEGFDO43915 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.3■□□□□ 0.36
VEGFDO43915 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.3■□□□□ 0.36
VEGFDO43915 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VEGFDO43915 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VEGFDO43915 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
VEGFDO43915 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
VEGFDO43915 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.29■□□□□ 0.36
VEGFDO43915 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VEGFDO43915 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 GNAS-203ENST00000306120 1878 ntBASIC17.29■□□□□ 0.36
VEGFDO43915 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.29■□□□□ 0.36
VEGFDO43915 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VEGFDO43915 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
VEGFDO43915 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VEGFDO43915 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.29■□□□□ 0.36
VEGFDO43915 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.29■□□□□ 0.36
VEGFDO43915 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 PRYP5-201ENST00000451909 266 ntBASIC17.29■□□□□ 0.36
VEGFDO43915 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
VEGFDO43915 STK19B-204ENST00000512515 211 ntBASIC17.29■□□□□ 0.36
VEGFDO43915 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VEGFDO43915 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.29■□□□□ 0.36
VEGFDO43915 NKAPP1-205ENST00000585790 367 ntBASIC17.29■□□□□ 0.36
VEGFDO43915 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VEGFDO43915 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.29■□□□□ 0.36
VEGFDO43915 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
VEGFDO43915 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.29■□□□□ 0.36
VEGFDO43915 AC133963.1-201ENST00000504166 1679 ntBASIC17.29■□□□□ 0.36
VEGFDO43915 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFDO43915 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VEGFDO43915 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.28■□□□□ 0.36
VEGFDO43915 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.28■□□□□ 0.36
VEGFDO43915 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
VEGFDO43915 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
VEGFDO43915 FAM197Y8-203ENST00000450145 560 ntBASIC17.28■□□□□ 0.36
VEGFDO43915 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 AC073648.2-201ENST00000510116 352 ntBASIC17.28■□□□□ 0.36
VEGFDO43915 AP002469.2-201ENST00000531724 424 ntBASIC17.28■□□□□ 0.36
VEGFDO43915 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.28■□□□□ 0.36
VEGFDO43915 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
VEGFDO43915 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
VEGFDO43915 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.28■□□□□ 0.36
VEGFDO43915 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VEGFDO43915 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFDO43915 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFDO43915 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFDO43915 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFDO43915 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFDO43915 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFDO43915 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFDO43915 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.27■□□□□ 0.36
VEGFDO43915 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.27■□□□□ 0.36
VEGFDO43915 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFDO43915 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFDO43915 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
VEGFDO43915 SIGLEC30P-201ENST00000455569 941 ntBASIC17.27■□□□□ 0.36
VEGFDO43915 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
VEGFDO43915 SART3-203ENST00000546611 1184 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms