Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC3O15379 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC3O15379 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.19■□□□□ 0.34
HDAC3O15379 AL157888.1-201ENST00000631930 593 ntBASIC17.19■□□□□ 0.34
HDAC3O15379 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.19■□□□□ 0.34
HDAC3O15379 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC3O15379 LINC01311-201ENST00000565162 1445 ntBASIC17.19■□□□□ 0.34
HDAC3O15379 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC3O15379 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC3O15379 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC3O15379 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC3O15379 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HDAC3O15379 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC3O15379 KRT89P-201ENST00000620027 1478 ntBASIC17.18■□□□□ 0.34
HDAC3O15379 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.18■□□□□ 0.34
HDAC3O15379 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.18■□□□□ 0.34
HDAC3O15379 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HDAC3O15379 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HDAC3O15379 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.18■□□□□ 0.34
HDAC3O15379 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 INGX-201ENST00000359239 846 ntBASIC17.18■□□□□ 0.34
HDAC3O15379 AC128688.1-201ENST00000487626 519 ntBASIC17.18■□□□□ 0.34
HDAC3O15379 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 MIR4785-201ENST00000585005 73 ntBASIC17.18■□□□□ 0.34
HDAC3O15379 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC3O15379 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HDAC3O15379 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HDAC3O15379 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HDAC3O15379 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HDAC3O15379 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HDAC3O15379 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HDAC3O15379 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HDAC3O15379 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HDAC3O15379 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HDAC3O15379 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.17■□□□□ 0.34
HDAC3O15379 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HDAC3O15379 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC3O15379 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.17■□□□□ 0.34
HDAC3O15379 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC3O15379 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC3O15379 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HDAC3O15379 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.17■□□□□ 0.34
HDAC3O15379 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.17■□□□□ 0.34
HDAC3O15379 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HDAC3O15379 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.17■□□□□ 0.34
HDAC3O15379 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.17■□□□□ 0.34
HDAC3O15379 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HDAC3O15379 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.17■□□□□ 0.34
HDAC3O15379 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HDAC3O15379 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HDAC3O15379 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
HDAC3O15379 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC3O15379 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC3O15379 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HDAC3O15379 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC3O15379 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
HDAC3O15379 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC3O15379 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
HDAC3O15379 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.16■□□□□ 0.34
HDAC3O15379 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.16■□□□□ 0.34
HDAC3O15379 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC3O15379 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC3O15379 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC3O15379 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC3O15379 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms