Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRABD2BA6NFA1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 AC135050.7-201ENST00000624508 2218 ntBASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 AC018845.2-201ENST00000568326 409 ntBASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRABD2BA6NFA1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 PRYP5-201ENST00000451909 266 ntBASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 AL513190.1-201ENST00000621254 727 ntBASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TRABD2BA6NFA1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 PCDHB18P-201ENST00000524813 2368 ntBASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 AL096865.1-201ENST00000606796 927 ntBASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 AC093028.1-201ENST00000622998 982 ntBASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 PMPCAP1-201ENST00000508114 1576 ntBASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRABD2BA6NFA1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.92■□□□□ 0.3
TRABD2BA6NFA1 VN2R19P-201ENST00000442399 1052 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms