Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 AC009949.1-201ENST00000623048 1830 ntBASIC21.17■□□□□ 0.98
USP17L4A6NCW7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.16■□□□□ 0.98
USP17L4A6NCW7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 RHOQP3-201ENST00000437982 621 ntBASIC21.16■□□□□ 0.98
USP17L4A6NCW7 DDX43P3-201ENST00000441064 443 ntBASIC21.16■□□□□ 0.98
USP17L4A6NCW7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP17L4A6NCW7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 LINC00982-205ENST00000420957 435 ntBASIC21.15■□□□□ 0.98
USP17L4A6NCW7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
USP17L4A6NCW7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.14■□□□□ 0.98
USP17L4A6NCW7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.14■□□□□ 0.98
USP17L4A6NCW7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
USP17L4A6NCW7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
USP17L4A6NCW7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
USP17L4A6NCW7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
USP17L4A6NCW7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP17L4A6NCW7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms