Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 CR769767.2-201ENST00000622735 460 ntBASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 AC112497.1-201ENST00000624824 639 ntBASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV18A0A075B6X5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV18A0A075B6X5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV18A0A075B6X5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
TRAV18A0A075B6X5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TRAV18A0A075B6X5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV18A0A075B6X5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV18A0A075B6X5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TRAV18A0A075B6X5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 CICP6-201ENST00000457191 2729 ntBASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 PKD1P5-201ENST00000532415 10291 ntBASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV18A0A075B6X5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 CRYGFP-201ENST00000418459 633 ntBASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 WWOX-216ENST00000569818 525 ntBASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 AC006058.3-201ENST00000606217 1069 ntBASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms