Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 AC079776.4-201ENST00000511039 504 ntBASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 RN7SL371P-201ENST00000578099 267 ntBASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 SLC25A6P4-201ENST00000586535 553 ntBASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGA4Q9Y5G9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 AC104819.1-201ENST00000504587 486 ntBASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA4Q9Y5G9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 AL662844.1-201ENST00000546340 181 ntBASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 AC138894.3-201ENST00000603787 634 ntBASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA4Q9Y5G9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 Z83836.1-201ENST00000624605 1642 ntBASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms