Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGC4Q9Y5F7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGC4Q9Y5F7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHGC4Q9Y5F7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGC4Q9Y5F7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 GNAS-203ENST00000306120 1878 ntBASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 AL450487.1-201ENST00000426799 995 ntBASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 IFNL4P1-201ENST00000607083 540 ntBASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 AC005332.8-201ENST00000622750 2735 ntBASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGC4Q9Y5F7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGC4Q9Y5F7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms