Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIP2Q9UDT6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 DUTP2-201ENST00000519164 463 ntBASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIP2Q9UDT6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 SLC25A6P4-201ENST00000586535 553 ntBASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 TP73-AS1-207ENST00000624167 988 ntBASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
CLIP2Q9UDT6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 AC007967.3-201ENST00000434308 558 ntBASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms