Protein–RNA interactions for Protein: Q9NZZ3

CHMP5, Charged multivesicular body protein 5, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5Q9NZZ3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CHMP5Q9NZZ3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 PCDHB17P-201ENST00000539533 2393 ntBASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 AC010240.3-201ENST00000607688 395 ntBASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP5Q9NZZ3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 AC006449.5-201ENST00000610658 2098 ntBASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 AC097488.1-201ENST00000507834 756 ntBASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.83■□□□□ 0.93
CHMP5Q9NZZ3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP5Q9NZZ3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP5Q9NZZ3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP5Q9NZZ3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP5Q9NZZ3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP5Q9NZZ3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP5Q9NZZ3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CHMP5Q9NZZ3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CHMP5Q9NZZ3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 AC008687.5-201ENST00000593746 558 ntBASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CHMP5Q9NZZ3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms