Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 AC006116.8-202ENST00000587620 1550 ntBASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 EGLN1P1-201ENST00000531623 762 ntBASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 PCDH8P1-201ENST00000428983 2773 ntBASIC15.41■□□□□ 0.06
PCDHB16Q9NRJ7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 TSPY14P-201ENST00000303979 915 ntBASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 AP000523.1-201ENST00000398242 1049 ntBASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 AC092865.7-201ENST00000641832 219 ntBASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 AL024508.2-201ENST00000607749 1894 ntBASIC15.4■□□□□ 0.06
PCDHB16Q9NRJ7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.39■□□□□ 0.06
PCDHB16Q9NRJ7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB16Q9NRJ7 NKILA-202ENST00000614771 2598 ntBASIC15.39■□□□□ 0.05
PCDHB16Q9NRJ7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms