Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPHK2Q9NRA0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPHK2Q9NRA0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SPHK2Q9NRA0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPHK2Q9NRA0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPHK2Q9NRA0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 AC005104.2-201ENST00000427818 678 ntBASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 ABALON-201ENST00000629058 1903 ntBASIC17.96■□□□□ 0.47
SPHK2Q9NRA0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 AC097637.2-201ENST00000624096 1997 ntBASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.95■□□□□ 0.46
SPHK2Q9NRA0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 RNF165-205ENST00000588679 2904 ntBASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 BICD1-207ENST00000551848 1962 ntBASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 MIR1233-2-201ENST00000408138 82 ntBASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 MIR1233-1-201ENST00000408722 82 ntBASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.94■□□□□ 0.46
SPHK2Q9NRA0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms