Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 AC011467.4-201ENST00000594891 528 ntBASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 PMPCAP1-201ENST00000508114 1576 ntBASIC19.7■□□□□ 0.74
PDLIM7Q9NR12 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 AC122714.2-201ENST00000502787 707 ntBASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 AL078644.1-201ENST00000609881 752 ntBASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 AC004817.3-201ENST00000602957 2129 ntBASIC19.69■□□□□ 0.74
PDLIM7Q9NR12 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 AC009949.1-201ENST00000623048 1830 ntBASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.68■□□□□ 0.74
PDLIM7Q9NR12 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 MKNK2P1-201ENST00000437526 628 ntBASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 AC018845.2-201ENST00000568326 409 ntBASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 AC239800.4-201ENST00000603712 296 ntBASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.67■□□□□ 0.74
PDLIM7Q9NR12 ELL2P1-201ENST00000413990 1906 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms