Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 AC005104.2-201ENST00000427818 678 ntBASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 AL049597.2-201ENST00000565575 961 ntBASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 AL121956.5-201ENST00000625261 221 ntBASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 AL031133.1-201ENST00000406807 723 ntBASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 AC090616.6-201ENST00000582640 721 ntBASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 AL592071.1-201ENST00000611956 408 ntBASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC40Q9H9A6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 RN7SL606P-201ENST00000472779 293 ntBASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC40Q9H9A6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 FAM210CP-201ENST00000445714 574 ntBASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 KRT8P26-201ENST00000534154 1276 ntBASIC17.92■□□□□ 0.46
LRRC40Q9H9A6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms