Protein–RNA interactions for Protein: Q9H3W5

LRRN3, Leucine-rich repeat neuronal protein 3, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3Q9H3W5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 AD001527.2-201ENST00000622994 785 ntBASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 KRT8P47-201ENST00000604727 1398 ntBASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 AP002414.3-201ENST00000589352 1468 ntBASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 AC103564.2-201ENST00000432853 1299 ntBASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 UNC93B6-202ENST00000528242 690 ntBASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRN3Q9H3W5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRN3Q9H3W5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
LRRN3Q9H3W5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRN3Q9H3W5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.08■□□□□ 0.33
LRRN3Q9H3W5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRN3Q9H3W5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRN3Q9H3W5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRN3Q9H3W5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
LRRN3Q9H3W5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRN3Q9H3W5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.08■□□□□ 0.33
LRRN3Q9H3W5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRN3Q9H3W5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 KRT18P3-201ENST00000451602 1288 ntBASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRN3Q9H3W5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRN3Q9H3W5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRN3Q9H3W5 AC073592.3-201ENST00000625118 1834 ntBASIC17.07■□□□□ 0.32
LRRN3Q9H3W5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRN3Q9H3W5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRN3Q9H3W5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRN3Q9H3W5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRRN3Q9H3W5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRRN3Q9H3W5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRN3Q9H3W5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRN3Q9H3W5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms