Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 AL139327.4-201ENST00000612362 153 ntBASIC18.63■□□□□ 0.57
LHX5Q9H2C1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 SIRPAP1-201ENST00000448467 1770 ntBASIC18.63■□□□□ 0.57
LHX5Q9H2C1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 LYSMD4-203ENST00000378904 2122 ntBASIC18.62■□□□□ 0.57
LHX5Q9H2C1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 PP12613-201ENST00000424958 2230 ntBASIC18.62■□□□□ 0.57
LHX5Q9H2C1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 RCN1P2-201ENST00000398357 915 ntBASIC18.62■□□□□ 0.57
LHX5Q9H2C1 IGHV3-52-201ENST00000519770 353 ntBASIC18.62■□□□□ 0.57
LHX5Q9H2C1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 AC109462.3-201ENST00000573934 613 ntBASIC18.62■□□□□ 0.57
LHX5Q9H2C1 AC114341.1-201ENST00000618070 349 ntBASIC18.62■□□□□ 0.57
LHX5Q9H2C1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LHX5Q9H2C1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 AL353593.2-201ENST00000602529 1483 ntBASIC18.61■□□□□ 0.57
LHX5Q9H2C1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 AD001527.2-201ENST00000622994 785 ntBASIC18.61■□□□□ 0.57
LHX5Q9H2C1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX5Q9H2C1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 KRT8P10-201ENST00000450021 1447 ntBASIC18.6■□□□□ 0.57
LHX5Q9H2C1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 AC096582.2-201ENST00000510860 516 ntBASIC18.6■□□□□ 0.57
LHX5Q9H2C1 AC111152.3-201ENST00000569699 673 ntBASIC18.6■□□□□ 0.57
LHX5Q9H2C1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LHX5Q9H2C1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms