Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.159e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-225ENST00000533614 553 ntTSL 421.56■■□□□ 1.049e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-226ENST00000533647 548 ntTSL 320.93■□□□□ 0.949e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-203ENST00000412341 1916 ntTSL 520.44■□□□□ 0.869e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-208ENST00000470787 1544 ntTSL 220.39■□□□□ 0.859e-20■■□□□ 13.2
CSTF2TQ9H0L4 BNIP3-204ENST00000633835 1062 ntTSL 319.88■□□□□ 0.771e-6■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-220ENST00000496411 1064 ntTSL 319.73■□□□□ 0.759e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-224ENST00000530986 595 ntTSL 419.28■□□□□ 0.689e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-212ENST00000478107 1051 ntTSL 519.26■□□□□ 0.679e-20■■□□□ 13.2
CSTF2TQ9H0L4 LZTR1-206ENST00000443265 698 ntTSL 519.08■□□□□ 0.641e-6■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-219ENST00000496231 656 ntTSL 319.05■□□□□ 0.649e-20■■□□□ 13.2
CSTF2TQ9H0L4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.638e-8■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.519e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.59e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-218ENST00000496053 694 ntTSL 317.34■□□□□ 0.379e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-215ENST00000483791 681 ntTSL 317.22■□□□□ 0.359e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-221ENST00000497847 1031 ntTSL 217.22■□□□□ 0.359e-20■■□□□ 13.2
CSTF2TQ9H0L4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.96■□□□□ 0.318e-8■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-207ENST00000468455 644 ntTSL 516.89■□□□□ 0.299e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-214ENST00000483223 901 ntTSL 316.68■□□□□ 0.269e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-227ENST00000533927 2026 ntTSL 1 (best)16.33■□□□□ 0.219e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-222ENST00000528141 576 ntTSL 415.96■□□□□ 0.159e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-223ENST00000530699 896 ntTSL 1 (best)15.66■□□□□ 0.19e-20■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-206ENST00000463519 2704 ntTSL 1 (best)14.57□□□□□ -0.089e-20■■□□□ 13.2
CSTF2TQ9H0L4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.45□□□□□ -0.18e-8■■□□□ 13.2
CSTF2TQ9H0L4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.21e-6■■□□□ 13.2
CSTF2TQ9H0L4 PHYKPL-206ENST00000476487 2251 ntTSL 213.53□□□□□ -0.241e-6■■□□□ 13.2
CSTF2TQ9H0L4 BNIP3-203ENST00000631806 752 ntTSL 213.44□□□□□ -0.261e-6■■□□□ 13.2
CSTF2TQ9H0L4 USP36-210ENST00000588086 3187 ntAPPRIS ALT2 TSL 1 (best)13.19□□□□□ -0.31e-6■■□□□ 13.2
CSTF2TQ9H0L4 PHYKPL-207ENST00000481436 2025 ntTSL 212.81□□□□□ -0.361e-6■■□□□ 13.2
CSTF2TQ9H0L4 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.393e-8■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-230ENST00000534660 552 ntTSL 312.39□□□□□ -0.439e-20■■□□□ 13.2
CSTF2TQ9H0L4 BNIP3-202ENST00000540159 3066 ntTSL 1 (best)12.35□□□□□ -0.431e-6■■□□□ 13.2
CSTF2TQ9H0L4 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.491e-6■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-216ENST00000491971 805 ntTSL 211.56□□□□□ -0.569e-20■■□□□ 13.2
CSTF2TQ9H0L4 PHYKPL-208ENST00000481811 2709 ntTSL 210.91□□□□□ -0.661e-6■■□□□ 13.2
CSTF2TQ9H0L4 PHYKPL-216ENST00000510991 814 ntTSL 310.61□□□□□ -0.711e-6■■□□□ 13.2
CSTF2TQ9H0L4 ZMYND8-215ENST00000468376 4064 ntTSL 1 (best)8.47□□□□□ -1.059e-10■■□□□ 13.2
CSTF2TQ9H0L4 PHYKPL-215ENST00000510913 643 ntTSL 37.47□□□□□ -1.211e-6■■□□□ 13.2
CSTF2TQ9H0L4 PRAF2-203ENST00000618882 439 ntTSL 57.2□□□□□ -1.268e-8■■□□□ 13.2
CSTF2TQ9H0L4 USP36-204ENST00000586066 960 ntTSL 56.83□□□□□ -1.321e-6■■□□□ 13.2
CSTF2TQ9H0L4 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.8□□□□□ -1.641e-6■■□□□ 13.2
CSTF2TQ9H0L4 AC009065.4-202ENST00000567888 274 ntTSL 523.44■■□□□ 1.342e-6■■□□□ 13.2
CSTF2TQ9H0L4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.56■□□□□ 0.562e-6■■□□□ 13.2
CSTF2TQ9H0L4 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC12.08□□□□□ -0.482e-6■■□□□ 13.2
CSTF2TQ9H0L4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.28□□□□□ -0.126e-8■■□□□ 13.2
CSTF2TQ9H0L4 MGAT4B-210ENST00000519965 524 ntTSL 312.25□□□□□ -0.453e-8■■□□□ 13.2
CSTF2TQ9H0L4 ABCC3-216ENST00000515585 484 ntTSL 312.31□□□□□ -0.445e-7■■□□□ 13.2
CSTF2TQ9H0L4 PRNP-204ENST00000457586 855 ntTSL 1 (best)22.07■■□□□ 1.121e-6■■□□□ 13.2
CSTF2TQ9H0L4 PRNP-202ENST00000424424 806 ntTSL 1 (best)17.49■□□□□ 0.391e-6■■□□□ 13.2
CSTF2TQ9H0L4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.221e-6■■□□□ 13.2
CSTF2TQ9H0L4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.271e-6■■□□□ 13.2
CSTF2TQ9H0L4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.75e-10■■□□□ 13.2
CSTF2TQ9H0L4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.75e-10■■□□□ 13.2
CSTF2TQ9H0L4 SELENOO-202ENST00000492092 1626 ntTSL 1 (best)18.09■□□□□ 0.495e-10■■□□□ 13.2
CSTF2TQ9H0L4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.35■□□□□ 0.534e-7■■□□□ 13.2
CSTF2TQ9H0L4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.99■□□□□ 0.474e-7■■□□□ 13.2
CSTF2TQ9H0L4 MTA1-208ENST00000438610 2144 ntTSL 1 (best)16.63■□□□□ 0.254e-7■■□□□ 13.2
CSTF2TQ9H0L4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.044e-7■■□□□ 13.2
CSTF2TQ9H0L4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.034e-7■■□□□ 13.2
CSTF2TQ9H0L4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.138e-7■■□□□ 13.2
CSTF2TQ9H0L4 CERS4-210ENST00000559490 420 ntTSL 520.09■□□□□ 0.818e-7■■□□□ 13.2
CSTF2TQ9H0L4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.1■□□□□ 0.178e-7■■□□□ 13.2
CSTF2TQ9H0L4 NELFA-211ENST00000458616 792 ntTSL 315.81■□□□□ 0.128e-7■■□□□ 13.2
CSTF2TQ9H0L4 ABCC3-218ENST00000571855 1562 nt15.38■□□□□ 0.058e-7■■□□□ 13.2
CSTF2TQ9H0L4 RHOT2-212ENST00000564659 854 ntTSL 215.12■□□□□ 0.018e-7■■□□□ 13.2
CSTF2TQ9H0L4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.018e-7■■□□□ 13.2
CSTF2TQ9H0L4 TFAP4-202ENST00000572393 507 ntTSL 314□□□□□ -0.178e-7■■□□□ 13.2
CSTF2TQ9H0L4 RHOT2-227ENST00000602564 3695 ntTSL 513.73□□□□□ -0.218e-7■■□□□ 13.2
CSTF2TQ9H0L4 RNF123-210ENST00000487805 5882 ntTSL 213.11□□□□□ -0.318e-7■■□□□ 13.2
CSTF2TQ9H0L4 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.358e-7■■□□□ 13.2
CSTF2TQ9H0L4 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.59□□□□□ -0.398e-7■■□□□ 13.2
CSTF2TQ9H0L4 ERI3-207ENST00000479101 367 ntTSL 312.39□□□□□ -0.438e-7■■□□□ 13.2
CSTF2TQ9H0L4 RNF123-209ENST00000486102 4564 ntTSL 1 (best)11.11□□□□□ -0.638e-7■■□□□ 13.2
CSTF2TQ9H0L4 TCP11L2-209ENST00000553098 985 ntTSL 510.52□□□□□ -0.738e-7■■□□□ 13.2
CSTF2TQ9H0L4 RNF123-207ENST00000457726 4506 ntTSL 1 (best)10.28□□□□□ -0.768e-7■■□□□ 13.2
CSTF2TQ9H0L4 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.828e-7■■□□□ 13.2
CSTF2TQ9H0L4 TCP11L2-202ENST00000546625 3198 ntTSL 1 (best) BASIC9.81□□□□□ -0.848e-7■■□□□ 13.2
CSTF2TQ9H0L4 RHOT2-208ENST00000562957 397 ntTSL 29.32□□□□□ -0.928e-7■■□□□ 13.2
CSTF2TQ9H0L4 ERI3-208ENST00000489710 394 ntTSL 39.11□□□□□ -0.958e-7■■□□□ 13.2
CSTF2TQ9H0L4 TCP11L2-205ENST00000549906 534 ntTSL 36.96□□□□□ -1.38e-7■■□□□ 13.2
CSTF2TQ9H0L4 TCP11L2-210ENST00000553143 153 ntTSL 1 (best)6.87□□□□□ -1.318e-7■■□□□ 13.2
CSTF2TQ9H0L4 ERI3-206ENST00000462341 320 ntTSL 36.23□□□□□ -1.418e-7■■□□□ 13.2
CSTF2TQ9H0L4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.232e-6■■□□□ 13.2
CSTF2TQ9H0L4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.162e-6■■□□□ 13.2
CSTF2TQ9H0L4 CIRBP-219ENST00000588411 619 ntTSL 520.56■□□□□ 0.882e-6■■□□□ 13.2
CSTF2TQ9H0L4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.552e-6■■□□□ 13.2
CSTF2TQ9H0L4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.392e-6■■□□□ 13.2
CSTF2TQ9H0L4 CIRBP-236ENST00000592051 573 ntTSL 410.38□□□□□ -0.752e-6■■□□□ 13.2
CSTF2TQ9H0L4 CLK2-204ENST00000471047 701 ntTSL 38.84□□□□□ -0.992e-6■■□□□ 13.2
CSTF2TQ9H0L4 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC11.68□□□□□ -0.546e-9■■□□□ 13.2
CSTF2TQ9H0L4 PTPRK-219ENST00000531050 2515 ntTSL 1 (best)7.85□□□□□ -1.155e-9■■□□□ 13.2
CSTF2TQ9H0L4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.635e-7■■□□□ 13.2
CSTF2TQ9H0L4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.635e-7■■□□□ 13.2
CSTF2TQ9H0L4 TMEM184A-209ENST00000449955 2224 ntTSL 218.41■□□□□ 0.542e-6■■□□□ 13.2
CSTF2TQ9H0L4 TMEM184A-206ENST00000421996 409 ntTSL 317.13■□□□□ 0.332e-6■■□□□ 13.2
CSTF2TQ9H0L4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.022e-6■■□□□ 13.2
CSTF2TQ9H0L4 TMEM184A-203ENST00000319018 4374 ntTSL 514.18□□□□□ -0.142e-6■■□□□ 13.2
CSTF2TQ9H0L4 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.533e-6■■□□□ 13.2
CSTF2TQ9H0L4 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC9.26□□□□□ -0.931e-7■■□□□ 13.1
Retrieved 100 of 19,151 protein–RNA pairs in 272.9 ms