Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.92■□□□□ 0.46
POLR1EQ9GZS1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.92■□□□□ 0.46
POLR1EQ9GZS1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1EQ9GZS1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
POLR1EQ9GZS1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1EQ9GZS1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1EQ9GZS1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1EQ9GZS1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1EQ9GZS1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1EQ9GZS1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 NUS1P1-201ENST00000446295 882 ntBASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 AC002558.1-201ENST00000488906 803 ntBASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 LINC00896-202ENST00000609602 2128 ntBASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
POLR1EQ9GZS1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 INTS4P1-201ENST00000438455 1935 ntBASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 RCN1P2-201ENST00000398357 915 ntBASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 NUS1P2-201ENST00000417358 873 ntBASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 AC138894.3-201ENST00000603787 634 ntBASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR1EQ9GZS1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
POLR1EQ9GZS1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
POLR1EQ9GZS1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
POLR1EQ9GZS1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 AC005332.8-201ENST00000622750 2735 ntBASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 SIRPAP1-201ENST00000448467 1770 ntBASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR1EQ9GZS1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms