Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP4-1Q9BYQ7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
KRTAP4-1Q9BYQ7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP4-1Q9BYQ7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC9.09□□□□□ -0.95
KRTAP4-1Q9BYQ7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP4-1Q9BYQ7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP4-1Q9BYQ7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP4-1Q9BYQ7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP4-1Q9BYQ7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC9.09□□□□□ -0.95
KRTAP4-1Q9BYQ7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP4-1Q9BYQ7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP4-1Q9BYQ7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
KRTAP4-1Q9BYQ7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 CCDC74BP1-201ENST00000508880 1123 ntBASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 TK1-204ENST00000590430 683 ntTSL 3 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 AC239800.4-201ENST00000603712 296 ntBASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 AC099522.2-201ENST00000607001 744 ntBASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 REXO1L3P-201ENST00000622202 1288 ntBASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 WIZP1-201ENST00000531444 2299 ntBASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 CYP51A1P2-201ENST00000419457 1499 ntBASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP4-1Q9BYQ7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 REXO1L9P-201ENST00000604264 2108 ntBASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 BX276092.7-203ENST00000637198 1536 ntBASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 FAM58DP-201ENST00000428076 619 ntBASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 AC023141.5-201ENST00000458585 616 ntBASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP4-1Q9BYQ7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms