Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
NEK1Q96PY6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.9■□□□□ 0.94
NEK1Q96PY6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
NEK1Q96PY6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.9■□□□□ 0.94
NEK1Q96PY6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.9■□□□□ 0.94
NEK1Q96PY6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
NEK1Q96PY6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.9■□□□□ 0.94
NEK1Q96PY6 AC091076.1-201ENST00000610741 619 ntBASIC20.9■□□□□ 0.94
NEK1Q96PY6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.9■□□□□ 0.94
NEK1Q96PY6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.9■□□□□ 0.94
NEK1Q96PY6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.9■□□□□ 0.94
NEK1Q96PY6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.9■□□□□ 0.94
NEK1Q96PY6 CROCCP2-202ENST00000412962 2773 ntBASIC20.9■□□□□ 0.94
NEK1Q96PY6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEK1Q96PY6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
NEK1Q96PY6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.89■□□□□ 0.94
NEK1Q96PY6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
NEK1Q96PY6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.89■□□□□ 0.94
NEK1Q96PY6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.89■□□□□ 0.94
NEK1Q96PY6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NEK1Q96PY6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NEK1Q96PY6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
NEK1Q96PY6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
NEK1Q96PY6 LYSMD4-203ENST00000378904 2122 ntBASIC20.89■□□□□ 0.94
NEK1Q96PY6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NEK1Q96PY6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NEK1Q96PY6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NEK1Q96PY6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NEK1Q96PY6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.89■□□□□ 0.93
NEK1Q96PY6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.89■□□□□ 0.93
NEK1Q96PY6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NEK1Q96PY6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.89■□□□□ 0.93
NEK1Q96PY6 AC002558.1-201ENST00000488906 803 ntBASIC20.89■□□□□ 0.93
NEK1Q96PY6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.89■□□□□ 0.93
NEK1Q96PY6 MIR3180-1-201ENST00000580374 94 ntBASIC20.89■□□□□ 0.93
NEK1Q96PY6 MIR3180-3-201ENST00000584616 94 ntBASIC20.89■□□□□ 0.93
NEK1Q96PY6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NEK1Q96PY6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
NEK1Q96PY6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NEK1Q96PY6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
NEK1Q96PY6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NEK1Q96PY6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NEK1Q96PY6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NEK1Q96PY6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.88■□□□□ 0.93
NEK1Q96PY6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NEK1Q96PY6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 TOB2P1-201ENST00000469761 992 ntBASIC20.88■□□□□ 0.93
NEK1Q96PY6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.88■□□□□ 0.93
NEK1Q96PY6 AC009533.2-201ENST00000543664 586 ntBASIC20.88■□□□□ 0.93
NEK1Q96PY6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
NEK1Q96PY6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.88■□□□□ 0.93
NEK1Q96PY6 AC069148.1-201ENST00000608741 768 ntBASIC20.88■□□□□ 0.93
NEK1Q96PY6 AC019129.2-201ENST00000609837 1235 ntBASIC20.88■□□□□ 0.93
NEK1Q96PY6 NPAP1P7-201ENST00000613027 823 ntBASIC20.88■□□□□ 0.93
NEK1Q96PY6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.88■□□□□ 0.93
NEK1Q96PY6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NEK1Q96PY6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NEK1Q96PY6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NEK1Q96PY6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEK1Q96PY6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NEK1Q96PY6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms