Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 AC092865.7-201ENST00000641832 219 ntBASIC16.82■□□□□ 0.28
LRRC58Q96CX6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.81■□□□□ 0.28
LRRC58Q96CX6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 AL390955.1-201ENST00000428694 934 ntBASIC16.81■□□□□ 0.28
LRRC58Q96CX6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 AC009947.2-201ENST00000444014 672 ntBASIC16.81■□□□□ 0.28
LRRC58Q96CX6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 AC098590.1-201ENST00000468126 897 ntBASIC16.81■□□□□ 0.28
LRRC58Q96CX6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 C2orf69P3-201ENST00000565542 1120 ntBASIC16.81■□□□□ 0.28
LRRC58Q96CX6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 AP000525.1-201ENST00000608286 694 ntBASIC16.81■□□□□ 0.28
LRRC58Q96CX6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 AC116353.5-201ENST00000638148 1699 ntBASIC16.81■□□□□ 0.28
LRRC58Q96CX6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC58Q96CX6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 FLJ38576-201ENST00000623820 2459 ntBASIC16.8■□□□□ 0.28
LRRC58Q96CX6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRRC58Q96CX6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms