Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 POU5F1P3-201ENST00000428824 1078 ntBASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CROCCP3Q8IVE0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 PRSS44-201ENST00000515154 1146 ntBASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CROCCP3Q8IVE0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms