Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 CD63-210ENST00000550776 870 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 NME2P1-201ENST00000426182 414 ntBASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 REXO1L11P-201ENST00000620964 1927 ntBASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 KLF4P1-201ENST00000412782 1185 ntBASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VPS13BQ7Z7G8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 STK25P1-201ENST00000585406 838 ntBASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 REXO1L9P-201ENST00000604264 2108 ntBASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 TNXA-203ENST00000507684 2038 ntBASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 SERBP1P5-201ENST00000510079 1181 ntBASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 AL512356.2-201ENST00000546955 174 ntBASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms