Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 AL139246.5-201ENST00000606645 996 ntBASIC13.38□□□□□ -0.27
MRPL54Q6P161 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 AC005915.1-201ENST00000624912 2018 ntBASIC13.38□□□□□ -0.27
MRPL54Q6P161 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.37□□□□□ -0.27
MRPL54Q6P161 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 PRSS44-201ENST00000515154 1146 ntBASIC13.37□□□□□ -0.27
MRPL54Q6P161 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 C1QL1P1-201ENST00000568105 661 ntBASIC13.37□□□□□ -0.27
MRPL54Q6P161 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 HLA-J-201ENST00000462773 1622 ntBASIC13.37□□□□□ -0.27
MRPL54Q6P161 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 PAUPAR-201ENST00000630360 2965 ntBASIC13.37□□□□□ -0.27
MRPL54Q6P161 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.37□□□□□ -0.27
MRPL54Q6P161 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MRPL54Q6P161 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL54Q6P161 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
MRPL54Q6P161 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL54Q6P161 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL54Q6P161 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL54Q6P161 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
MRPL54Q6P161 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL54Q6P161 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.36□□□□□ -0.27
MRPL54Q6P161 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.36□□□□□ -0.27
MRPL54Q6P161 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms