Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AC012640.2-201ENST00000561606 901 ntBASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 AC148477.5-201ENST00000625164 1645 ntBASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SWSAP1Q6NVH7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.64■□□□□ 0.74
SWSAP1Q6NVH7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SWSAP1Q6NVH7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
SWSAP1Q6NVH7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 IGHV3-52-201ENST00000519770 353 ntBASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 AC107918.4-202ENST00000641623 219 ntBASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 AF228730.7-201ENST00000641842 219 ntBASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SWSAP1Q6NVH7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 HLA-J-201ENST00000462773 1622 ntBASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 SLC25A1P1-201ENST00000528351 927 ntBASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 STK25P1-201ENST00000585406 838 ntBASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 AL390961.4-201ENST00000623958 2535 ntBASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SWSAP1Q6NVH7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms