Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 KRT8P47-201ENST00000604727 1398 ntBASIC17.21■□□□□ 0.35
SGO1Q5FBB7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 AP003733.1-201ENST00000491725 852 ntBASIC17.21■□□□□ 0.35
SGO1Q5FBB7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 AC006011.2-201ENST00000621313 1158 ntBASIC17.21■□□□□ 0.35
SGO1Q5FBB7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SGO1Q5FBB7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SGO1Q5FBB7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.21■□□□□ 0.34
SGO1Q5FBB7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.21■□□□□ 0.34
SGO1Q5FBB7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.21■□□□□ 0.34
SGO1Q5FBB7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SGO1Q5FBB7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SGO1Q5FBB7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SGO1Q5FBB7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 AC092647.4-201ENST00000457211 535 ntBASIC17.2■□□□□ 0.34
SGO1Q5FBB7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 LINC01023-201ENST00000606054 436 ntBASIC17.2■□□□□ 0.34
SGO1Q5FBB7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 AC133963.1-201ENST00000504166 1679 ntBASIC17.2■□□□□ 0.34
SGO1Q5FBB7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SGO1Q5FBB7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 AC080080.1-201ENST00000625121 2420 ntBASIC17.19■□□□□ 0.34
SGO1Q5FBB7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 AC112907.2-201ENST00000448639 330 ntBASIC17.19■□□□□ 0.34
SGO1Q5FBB7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.19■□□□□ 0.34
SGO1Q5FBB7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SGO1Q5FBB7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms