Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CERKLQ49MI3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CERKLQ49MI3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CERKLQ49MI3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CERKLQ49MI3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CERKLQ49MI3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CERKLQ49MI3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CERKLQ49MI3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CERKLQ49MI3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 AC040169.1-201ENST00000565382 521 ntBASIC20.59■□□□□ 0.89
CERKLQ49MI3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CERKLQ49MI3 AC097637.2-201ENST00000624096 1997 ntBASIC20.59■□□□□ 0.89
CERKLQ49MI3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CERKLQ49MI3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CERKLQ49MI3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.59■□□□□ 0.89
CERKLQ49MI3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CERKLQ49MI3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CERKLQ49MI3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CERKLQ49MI3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CERKLQ49MI3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CERKLQ49MI3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CERKLQ49MI3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CERKLQ49MI3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 MYCLP1-201ENST00000372451 1075 ntBASIC20.58■□□□□ 0.89
CERKLQ49MI3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
CERKLQ49MI3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CERKLQ49MI3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CERKLQ49MI3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.58■□□□□ 0.88
CERKLQ49MI3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CERKLQ49MI3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.58■□□□□ 0.88
CERKLQ49MI3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CERKLQ49MI3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CERKLQ49MI3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CERKLQ49MI3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CERKLQ49MI3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.58■□□□□ 0.88
CERKLQ49MI3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CERKLQ49MI3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CERKLQ49MI3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CERKLQ49MI3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CERKLQ49MI3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CERKLQ49MI3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CERKLQ49MI3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.57■□□□□ 0.88
CERKLQ49MI3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CERKLQ49MI3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
CERKLQ49MI3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.57■□□□□ 0.88
CERKLQ49MI3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CERKLQ49MI3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.57■□□□□ 0.88
CERKLQ49MI3 AC064836.3-201ENST00000607928 673 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms