Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.84■□□□□ 0.61
CDR2Q01850 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.84■□□□□ 0.61
CDR2Q01850 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.84■□□□□ 0.61
CDR2Q01850 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 FAM210CP-201ENST00000445714 574 ntBASIC18.84■□□□□ 0.61
CDR2Q01850 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.84■□□□□ 0.61
CDR2Q01850 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 KRT8P26-201ENST00000534154 1276 ntBASIC18.84■□□□□ 0.61
CDR2Q01850 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.84■□□□□ 0.61
CDR2Q01850 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.84■□□□□ 0.61
CDR2Q01850 AC090616.6-201ENST00000582640 721 ntBASIC18.84■□□□□ 0.61
CDR2Q01850 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CDR2Q01850 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.84■□□□□ 0.61
CDR2Q01850 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.84■□□□□ 0.61
CDR2Q01850 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDR2Q01850 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.84■□□□□ 0.61
CDR2Q01850 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 AC010460.3-201ENST00000511359 1579 ntBASIC18.84■□□□□ 0.61
CDR2Q01850 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CDR2Q01850 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.84■□□□□ 0.61
CDR2Q01850 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDR2Q01850 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.84■□□□□ 0.61
CDR2Q01850 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.83■□□□□ 0.61
CDR2Q01850 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDR2Q01850 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDR2Q01850 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDR2Q01850 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.83■□□□□ 0.61
CDR2Q01850 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDR2Q01850 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDR2Q01850 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
CDR2Q01850 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDR2Q01850 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDR2Q01850 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CDR2Q01850 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CDR2Q01850 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDR2Q01850 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDR2Q01850 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDR2Q01850 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.83■□□□□ 0.61
CDR2Q01850 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 AL845331.1-201ENST00000424978 1190 ntBASIC18.83■□□□□ 0.6
CDR2Q01850 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 NTF6B-201ENST00000591913 560 ntBASIC18.83■□□□□ 0.6
CDR2Q01850 AC124864.1-201ENST00000623408 392 ntBASIC18.83■□□□□ 0.6
CDR2Q01850 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.83■□□□□ 0.6
CDR2Q01850 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CDR2Q01850 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CDR2Q01850 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDR2Q01850 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDR2Q01850 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDR2Q01850 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDR2Q01850 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.82■□□□□ 0.6
CDR2Q01850 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.82■□□□□ 0.6
CDR2Q01850 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.82■□□□□ 0.6
CDR2Q01850 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDR2Q01850 COX5BP2-201ENST00000392354 334 ntBASIC18.82■□□□□ 0.6
CDR2Q01850 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.82■□□□□ 0.6
CDR2Q01850 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.82■□□□□ 0.6
CDR2Q01850 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.82■□□□□ 0.6
CDR2Q01850 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.82■□□□□ 0.6
CDR2Q01850 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.82■□□□□ 0.6
CDR2Q01850 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.82■□□□□ 0.6
CDR2Q01850 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.82■□□□□ 0.6
CDR2Q01850 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDR2Q01850 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDR2Q01850 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.81■□□□□ 0.6
CDR2Q01850 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDR2Q01850 AC005332.1-201ENST00000577698 1310 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms