Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 KRT8P47-201ENST00000604727 1398 ntBASIC17.22■□□□□ 0.35
EPHA3P29320 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
EPHA3P29320 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
EPHA3P29320 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.22■□□□□ 0.35
EPHA3P29320 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.22■□□□□ 0.35
EPHA3P29320 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.22■□□□□ 0.35
EPHA3P29320 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.22■□□□□ 0.35
EPHA3P29320 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.21■□□□□ 0.35
EPHA3P29320 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.21■□□□□ 0.35
EPHA3P29320 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
EPHA3P29320 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.21■□□□□ 0.35
EPHA3P29320 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.21■□□□□ 0.35
EPHA3P29320 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.21■□□□□ 0.35
EPHA3P29320 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 AC105020.1-201ENST00000435356 2205 ntBASIC17.21■□□□□ 0.35
EPHA3P29320 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.21■□□□□ 0.35
EPHA3P29320 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 OR6D1P-203ENST00000641209 4860 ntBASIC17.21■□□□□ 0.35
EPHA3P29320 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
EPHA3P29320 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
EPHA3P29320 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.21■□□□□ 0.35
EPHA3P29320 MIR1238-201ENST00000408483 83 ntBASIC17.21■□□□□ 0.35
EPHA3P29320 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.21■□□□□ 0.35
EPHA3P29320 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.21■□□□□ 0.35
EPHA3P29320 C2orf69P3-201ENST00000565542 1120 ntBASIC17.21■□□□□ 0.35
EPHA3P29320 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.21■□□□□ 0.35
EPHA3P29320 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
EPHA3P29320 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
EPHA3P29320 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.21■□□□□ 0.35
EPHA3P29320 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.21■□□□□ 0.35
EPHA3P29320 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA3P29320 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
EPHA3P29320 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
EPHA3P29320 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
EPHA3P29320 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
EPHA3P29320 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHA3P29320 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHA3P29320 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHA3P29320 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
EPHA3P29320 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
EPHA3P29320 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.2■□□□□ 0.34
EPHA3P29320 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHA3P29320 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.2■□□□□ 0.34
EPHA3P29320 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.2■□□□□ 0.34
EPHA3P29320 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.2■□□□□ 0.34
EPHA3P29320 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA3P29320 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA3P29320 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA3P29320 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA3P29320 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHA3P29320 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA3P29320 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
EPHA3P29320 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.19■□□□□ 0.34
EPHA3P29320 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHA3P29320 TSPY14P-201ENST00000303979 915 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms