Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2AFB1P0C5Y9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
H2AFB1P0C5Y9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2AFB1P0C5Y9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2AFB1P0C5Y9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2AFB1P0C5Y9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
H2AFB1P0C5Y9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2AFB1P0C5Y9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.29□□□□□ -0.12
H2AFB1P0C5Y9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 AC093787.1-201ENST00000450396 207 ntBASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 AC131212.1-201ENST00000613771 668 ntBASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2AFB1P0C5Y9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2AFB1P0C5Y9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 POU5F1P3-201ENST00000428824 1078 ntBASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2AFB1P0C5Y9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2AFB1P0C5Y9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms