Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PFDN1O60925 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.79■□□□□ 0.12
PFDN1O60925 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.79■□□□□ 0.12
PFDN1O60925 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PFDN1O60925 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PFDN1O60925 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PFDN1O60925 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PFDN1O60925 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.78■□□□□ 0.12
PFDN1O60925 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.78■□□□□ 0.12
PFDN1O60925 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.78■□□□□ 0.12
PFDN1O60925 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PFDN1O60925 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 PGM5P4-201ENST00000421970 445 ntBASIC15.78■□□□□ 0.12
PFDN1O60925 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.78■□□□□ 0.12
PFDN1O60925 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.78■□□□□ 0.12
PFDN1O60925 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
PFDN1O60925 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.78■□□□□ 0.12
PFDN1O60925 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.78■□□□□ 0.12
PFDN1O60925 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PFDN1O60925 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PFDN1O60925 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.78■□□□□ 0.12
PFDN1O60925 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.78■□□□□ 0.12
PFDN1O60925 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PFDN1O60925 AC007686.3-201ENST00000619017 3487 ntBASIC15.77■□□□□ 0.12
PFDN1O60925 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.77■□□□□ 0.12
PFDN1O60925 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PFDN1O60925 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PFDN1O60925 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PFDN1O60925 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PFDN1O60925 AC092171.3-201ENST00000610122 2651 ntBASIC15.77■□□□□ 0.12
PFDN1O60925 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PFDN1O60925 AC026748.1-201ENST00000624349 3251 ntBASIC15.77■□□□□ 0.12
PFDN1O60925 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PFDN1O60925 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PFDN1O60925 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PFDN1O60925 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.77■□□□□ 0.12
PFDN1O60925 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PFDN1O60925 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.77■□□□□ 0.12
PFDN1O60925 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PFDN1O60925 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.77■□□□□ 0.12
PFDN1O60925 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PFDN1O60925 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
PFDN1O60925 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PFDN1O60925 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PFDN1O60925 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PFDN1O60925 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PFDN1O60925 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PFDN1O60925 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PFDN1O60925 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.77■□□□□ 0.11
PFDN1O60925 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PFDN1O60925 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PFDN1O60925 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
PFDN1O60925 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PFDN1O60925 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PFDN1O60925 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
PFDN1O60925 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.77■□□□□ 0.11
PFDN1O60925 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PFDN1O60925 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
PFDN1O60925 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PFDN1O60925 AC112777.1-201ENST00000540175 1423 ntBASIC15.77■□□□□ 0.11
PFDN1O60925 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PFDN1O60925 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PFDN1O60925 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms