Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SMAD6O43541 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
SMAD6O43541 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.83■□□□□ 0.45
SMAD6O43541 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMAD6O43541 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.83■□□□□ 0.44
SMAD6O43541 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.83■□□□□ 0.44
SMAD6O43541 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SMAD6O43541 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SMAD6O43541 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
SMAD6O43541 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SMAD6O43541 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.83■□□□□ 0.44
SMAD6O43541 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SMAD6O43541 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SMAD6O43541 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD6O43541 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.83■□□□□ 0.44
SMAD6O43541 AC064862.7-201ENST00000604520 867 ntBASIC17.83■□□□□ 0.44
SMAD6O43541 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.83■□□□□ 0.44
SMAD6O43541 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SMAD6O43541 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SMAD6O43541 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD6O43541 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD6O43541 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD6O43541 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SMAD6O43541 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.83■□□□□ 0.44
SMAD6O43541 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SMAD6O43541 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.82■□□□□ 0.44
SMAD6O43541 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.82■□□□□ 0.44
SMAD6O43541 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SMAD6O43541 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SMAD6O43541 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SMAD6O43541 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.82■□□□□ 0.44
SMAD6O43541 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 RPS2P1-201ENST00000434010 821 ntBASIC17.82■□□□□ 0.44
SMAD6O43541 SLC25A6P5-201ENST00000435663 894 ntBASIC17.82■□□□□ 0.44
SMAD6O43541 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.82■□□□□ 0.44
SMAD6O43541 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
SMAD6O43541 AP001005.1-201ENST00000571755 1248 ntBASIC17.82■□□□□ 0.44
SMAD6O43541 MTDHP4-201ENST00000600287 670 ntBASIC17.82■□□□□ 0.44
SMAD6O43541 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.82■□□□□ 0.44
SMAD6O43541 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD6O43541 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.82■□□□□ 0.44
SMAD6O43541 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SMAD6O43541 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
SMAD6O43541 SIGLEC16-201ENST00000599858 1437 ntBASIC17.81■□□□□ 0.44
SMAD6O43541 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SMAD6O43541 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.81■□□□□ 0.44
SMAD6O43541 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SMAD6O43541 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SMAD6O43541 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SMAD6O43541 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.81■□□□□ 0.44
SMAD6O43541 AC005104.2-201ENST00000427818 678 ntBASIC17.81■□□□□ 0.44
SMAD6O43541 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 AC002558.1-201ENST00000488906 803 ntBASIC17.81■□□□□ 0.44
SMAD6O43541 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.81■□□□□ 0.44
SMAD6O43541 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.81■□□□□ 0.44
SMAD6O43541 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
SMAD6O43541 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SMAD6O43541 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.81■□□□□ 0.44
SMAD6O43541 STK25P1-201ENST00000585406 838 ntBASIC17.81■□□□□ 0.44
SMAD6O43541 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.81■□□□□ 0.44
SMAD6O43541 FAM215A-202ENST00000632077 792 ntBASIC17.81■□□□□ 0.44
SMAD6O43541 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.81■□□□□ 0.44
SMAD6O43541 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.81■□□□□ 0.44
SMAD6O43541 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
SMAD6O43541 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SMAD6O43541 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SMAD6O43541 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SMAD6O43541 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SMAD6O43541 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD6O43541 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD6O43541 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms