Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN4O14493 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN4O14493 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN4O14493 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN4O14493 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CLDN4O14493 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN4O14493 AC007613.1-201ENST00000572811 2597 ntBASIC16.67■□□□□ 0.26
CLDN4O14493 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN4O14493 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN4O14493 AC122714.2-201ENST00000502787 707 ntBASIC16.67■□□□□ 0.26
CLDN4O14493 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN4O14493 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN4O14493 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN4O14493 AC091304.2-201ENST00000564639 760 ntBASIC16.67■□□□□ 0.26
CLDN4O14493 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLDN4O14493 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CLDN4O14493 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN4O14493 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN4O14493 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN4O14493 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN4O14493 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLDN4O14493 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN4O14493 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
CLDN4O14493 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN4O14493 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLDN4O14493 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLDN4O14493 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN4O14493 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN4O14493 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN4O14493 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN4O14493 AC010460.3-201ENST00000511359 1579 ntBASIC16.66■□□□□ 0.26
CLDN4O14493 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.66■□□□□ 0.26
CLDN4O14493 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN4O14493 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 MIR5100-201ENST00000579544 119 ntBASIC16.66■□□□□ 0.26
CLDN4O14493 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 AL591684.3-201ENST00000605187 298 ntBASIC16.66■□□□□ 0.26
CLDN4O14493 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLDN4O14493 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN4O14493 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLDN4O14493 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN4O14493 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLDN4O14493 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN4O14493 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN4O14493 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLDN4O14493 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN4O14493 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLDN4O14493 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN4O14493 AC008764.6-201ENST00000595909 2069 ntBASIC16.65■□□□□ 0.26
CLDN4O14493 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN4O14493 RCN1P2-201ENST00000398357 915 ntBASIC16.65■□□□□ 0.26
CLDN4O14493 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN4O14493 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN4O14493 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN4O14493 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms