Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.92■□□□□ 0.62
FOXN3O00409 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXN3O00409 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.92■□□□□ 0.62
FOXN3O00409 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN3O00409 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN3O00409 AP001094.4-201ENST00000579008 2176 ntBASIC18.92■□□□□ 0.62
FOXN3O00409 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN3O00409 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN3O00409 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
FOXN3O00409 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
FOXN3O00409 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXN3O00409 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
FOXN3O00409 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
FOXN3O00409 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN3O00409 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN3O00409 BX276092.5-203ENST00000456199 560 ntBASIC18.91■□□□□ 0.62
FOXN3O00409 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN3O00409 AL138831.2-201ENST00000606564 490 ntBASIC18.91■□□□□ 0.62
FOXN3O00409 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN3O00409 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.91■□□□□ 0.62
FOXN3O00409 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN3O00409 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN3O00409 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN3O00409 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN3O00409 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXN3O00409 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 PCED1CP-201ENST00000419887 785 ntBASIC18.9■□□□□ 0.62
FOXN3O00409 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXN3O00409 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXN3O00409 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXN3O00409 AC087388.1-201ENST00000571370 1112 ntBASIC18.9■□□□□ 0.62
FOXN3O00409 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
FOXN3O00409 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
FOXN3O00409 AL121672.3-201ENST00000608644 468 ntBASIC18.9■□□□□ 0.62
FOXN3O00409 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
FOXN3O00409 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXN3O00409 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXN3O00409 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN3O00409 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.62
FOXN3O00409 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXN3O00409 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
FOXN3O00409 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXN3O00409 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.89■□□□□ 0.62
FOXN3O00409 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXN3O00409 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXN3O00409 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
FOXN3O00409 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
FOXN3O00409 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXN3O00409 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
FOXN3O00409 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 CHCHD2P8-201ENST00000429873 447 ntBASIC18.89■□□□□ 0.61
FOXN3O00409 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXN3O00409 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXN3O00409 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXN3O00409 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN3O00409 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms