Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFRSF11BO00300 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.36■□□□□ 0.21
TNFRSF11BO00300 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TNFRSF11BO00300 AC016396.2-201ENST00000562575 1417 ntBASIC16.36■□□□□ 0.21
TNFRSF11BO00300 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 FITM1-202ENST00000559294 800 ntBASIC16.35■□□□□ 0.21
TNFRSF11BO00300 MIR3917-201ENST00000580971 93 ntBASIC16.35■□□□□ 0.21
TNFRSF11BO00300 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 AC092865.7-201ENST00000641832 219 ntBASIC16.35■□□□□ 0.21
TNFRSF11BO00300 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNFRSF11BO00300 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 UBALD1-205ENST00000590891 2641 ntBASIC16.34■□□□□ 0.21
TNFRSF11BO00300 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms