Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC188H7C350 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC188H7C350 NEK4P2-201ENST00000580004 1012 ntBASIC18.39■□□□□ 0.53
CCDC188H7C350 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC188H7C350 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC188H7C350 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC188H7C350 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC188H7C350 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC188H7C350 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC188H7C350 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC188H7C350 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC188H7C350 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC188H7C350 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC188H7C350 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC188H7C350 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC188H7C350 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
CCDC188H7C350 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC188H7C350 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC188H7C350 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC188H7C350 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CCDC188H7C350 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC188H7C350 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC188H7C350 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC188H7C350 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 UBALD1-205ENST00000590891 2641 ntBASIC18.38■□□□□ 0.53
CCDC188H7C350 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 OR6D1P-203ENST00000641209 4860 ntBASIC18.38■□□□□ 0.53
CCDC188H7C350 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC188H7C350 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC188H7C350 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC188H7C350 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC188H7C350 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC188H7C350 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC188H7C350 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC188H7C350 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC188H7C350 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC188H7C350 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC188H7C350 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC188H7C350 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC188H7C350 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC188H7C350 AL512604.3-201ENST00000569583 964 ntBASIC18.37■□□□□ 0.53
CCDC188H7C350 AP000525.1-201ENST00000608286 694 ntBASIC18.37■□□□□ 0.53
CCDC188H7C350 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC188H7C350 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC188H7C350 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC188H7C350 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC188H7C350 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC188H7C350 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC188H7C350 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC188H7C350 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC188H7C350 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC188H7C350 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC188H7C350 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC188H7C350 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC188H7C350 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC188H7C350 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC188H7C350 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC188H7C350 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC188H7C350 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC188H7C350 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC188H7C350 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC188H7C350 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC188H7C350 AL390955.1-201ENST00000428694 934 ntBASIC18.36■□□□□ 0.53
CCDC188H7C350 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC188H7C350 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC188H7C350 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC188H7C350 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC188H7C350 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC188H7C350 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC188H7C350 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC188H7C350 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC188H7C350 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC188H7C350 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC188H7C350 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC188H7C350 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC188H7C350 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC188H7C350 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms