Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 DDX43P3-201ENST00000441064 443 ntBASIC13.95□□□□□ -0.18
LINC01548A6NM66 AF238378.1-201ENST00000526806 358 ntBASIC13.95□□□□□ -0.18
LINC01548A6NM66 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 LINC01711-201ENST00000598340 967 ntBASIC13.95□□□□□ -0.18
LINC01548A6NM66 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 AP001269.4-201ENST00000609611 512 ntBASIC13.95□□□□□ -0.18
LINC01548A6NM66 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 NOC2LP2-201ENST00000407594 1944 ntBASIC13.95□□□□□ -0.18
LINC01548A6NM66 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01548A6NM66 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
LINC01548A6NM66 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 AL355312.1-201ENST00000407115 2176 ntBASIC13.93□□□□□ -0.18
LINC01548A6NM66 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 KRT8P10-201ENST00000450021 1447 ntBASIC13.93□□□□□ -0.18
LINC01548A6NM66 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 SLC25A6P5-201ENST00000435663 894 ntBASIC13.93□□□□□ -0.18
LINC01548A6NM66 AC079781.3-201ENST00000449110 356 ntBASIC13.93□□□□□ -0.18
LINC01548A6NM66 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 AC122714.2-201ENST00000502787 707 ntBASIC13.93□□□□□ -0.18
LINC01548A6NM66 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01548A6NM66 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC01548A6NM66 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms