Protein–RNA interactions for Protein: A6NGB9

WIPF3, WAS/WASL-interacting protein family member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF3A6NGB9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
WIPF3A6NGB9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
WIPF3A6NGB9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
WIPF3A6NGB9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
WIPF3A6NGB9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
WIPF3A6NGB9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
WIPF3A6NGB9 AP002414.3-201ENST00000589352 1468 ntBASIC15.97■□□□□ 0.15
WIPF3A6NGB9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
WIPF3A6NGB9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
WIPF3A6NGB9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 AL035633.1-201ENST00000406139 838 ntBASIC15.96■□□□□ 0.15
WIPF3A6NGB9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 SNHG9-202ENST00000564014 471 ntBASIC15.96■□□□□ 0.15
WIPF3A6NGB9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 NKAPP1-205ENST00000585790 367 ntBASIC15.96■□□□□ 0.15
WIPF3A6NGB9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 AC068587.9-201ENST00000641814 219 ntBASIC15.96■□□□□ 0.15
WIPF3A6NGB9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WIPF3A6NGB9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
WIPF3A6NGB9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
WIPF3A6NGB9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
WIPF3A6NGB9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
WIPF3A6NGB9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
WIPF3A6NGB9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 AL163051.1-201ENST00000569214 1512 ntBASIC15.95■□□□□ 0.14
WIPF3A6NGB9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
WIPF3A6NGB9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 LAGE3P1-201ENST00000425356 484 ntBASIC15.94■□□□□ 0.14
WIPF3A6NGB9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.94■□□□□ 0.14
WIPF3A6NGB9 KRT18P41-201ENST00000518924 1277 ntBASIC15.94■□□□□ 0.14
WIPF3A6NGB9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms