Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 AC090164.3-201ENST00000610780 2143 ntBASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 AC018470.1-201ENST00000624790 3129 ntBASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 SPDYE21P-201ENST00000413323 827 ntBASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 BX005266.1-201ENST00000473402 457 ntBASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 UNC93B6-202ENST00000528242 690 ntBASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.29■□□□□ 0.36
CSNK1G3Q9Y6M4 HCG11-201ENST00000411553 5696 ntBASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 AL356488.2-201ENST00000602755 427 ntBASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 MIR1199-201ENST00000621445 119 ntBASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CSNK1G3Q9Y6M4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 AP002414.3-201ENST00000589352 1468 ntBASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 KRT18P27-201ENST00000427733 1299 ntBASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 KRT18P3-201ENST00000451602 1288 ntBASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 AC073592.5-201ENST00000624854 528 ntBASIC17.27■□□□□ 0.36
CSNK1G3Q9Y6M4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms