Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 KRT19P1-201ENST00000405746 1186 ntBASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC23.67■■□□□ 1.38
GTF3C3Q9Y5Q9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 AL009178.2-201ENST00000597278 2719 ntBASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 POU5F1P3-201ENST00000428824 1078 ntBASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 AC006557.6-201ENST00000623071 864 ntBASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 AC092053.1-201ENST00000605787 1936 ntBASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC23.66■■□□□ 1.38
GTF3C3Q9Y5Q9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 AC104581.4-201ENST00000623126 3052 ntBASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 HLA-A-209ENST00000638375 975 ntBASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 CICP4-201ENST00000447359 2812 ntBASIC23.65■■□□□ 1.38
GTF3C3Q9Y5Q9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC23.64■■□□□ 1.38
GTF3C3Q9Y5Q9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC23.64■■□□□ 1.38
GTF3C3Q9Y5Q9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
GTF3C3Q9Y5Q9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
GTF3C3Q9Y5Q9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC23.64■■□□□ 1.38
GTF3C3Q9Y5Q9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
GTF3C3Q9Y5Q9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
GTF3C3Q9Y5Q9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC23.64■■□□□ 1.38
GTF3C3Q9Y5Q9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
GTF3C3Q9Y5Q9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.64■■□□□ 1.37
GTF3C3Q9Y5Q9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
GTF3C3Q9Y5Q9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.64■■□□□ 1.37
GTF3C3Q9Y5Q9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
GTF3C3Q9Y5Q9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
GTF3C3Q9Y5Q9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
GTF3C3Q9Y5Q9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
GTF3C3Q9Y5Q9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
GTF3C3Q9Y5Q9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms