Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 AL353593.2-201ENST00000602529 1483 ntBASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
PCDHGC3Q9UN70 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGC3Q9UN70 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDHGC3Q9UN70 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 IGHV3-52-201ENST00000519770 353 ntBASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 AC114341.1-201ENST00000618070 349 ntBASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 AL645608.8-201ENST00000606034 2086 ntBASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 AC141586.5-201ENST00000624546 2050 ntBASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGC3Q9UN70 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 AC139713.2-201ENST00000641328 2723 ntBASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 RCN1P2-201ENST00000398357 915 ntBASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 AC096582.2-201ENST00000510860 516 ntBASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 AD001527.2-201ENST00000622994 785 ntBASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 KRT8P10-201ENST00000450021 1447 ntBASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGC3Q9UN70 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 AC111152.3-201ENST00000569699 673 ntBASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms