Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 BICD1-207ENST00000551848 1962 ntBASIC16.64■□□□□ 0.25
CTSFQ9UBX1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 HNRNPDP1-201ENST00000439535 754 ntBASIC16.64■□□□□ 0.25
CTSFQ9UBX1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 AL049840.3-201ENST00000602669 611 ntBASIC16.64■□□□□ 0.25
CTSFQ9UBX1 AC120114.3-201ENST00000611923 658 ntBASIC16.64■□□□□ 0.25
CTSFQ9UBX1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 AC116407.2-201ENST00000613639 860 ntBASIC16.64■□□□□ 0.25
CTSFQ9UBX1 MIR7706-201ENST00000613747 67 ntBASIC16.64■□□□□ 0.25
CTSFQ9UBX1 AL139288.1-201ENST00000623748 933 ntBASIC16.64■□□□□ 0.25
CTSFQ9UBX1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 ABALON-201ENST00000629058 1903 ntBASIC16.64■□□□□ 0.25
CTSFQ9UBX1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 FLJ13224-201ENST00000313737 1514 ntBASIC16.64■□□□□ 0.25
CTSFQ9UBX1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.64■□□□□ 0.25
CTSFQ9UBX1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 PMPCAP1-201ENST00000508114 1576 ntBASIC16.63■□□□□ 0.25
CTSFQ9UBX1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.63■□□□□ 0.25
CTSFQ9UBX1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 AC138028.4-201ENST00000564984 1845 ntBASIC16.62■□□□□ 0.25
CTSFQ9UBX1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms