Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.46■□□□□ 0.39
MKS1Q9NXB0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MKS1Q9NXB0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
MKS1Q9NXB0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.46■□□□□ 0.38
MKS1Q9NXB0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 ECEL1P3-201ENST00000427961 737 ntBASIC17.45■□□□□ 0.38
MKS1Q9NXB0 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.45■□□□□ 0.38
MKS1Q9NXB0 CYP2D8P-201ENST00000433633 1490 ntBASIC17.44■□□□□ 0.38
MKS1Q9NXB0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 MIR718-201ENST00000390190 70 ntBASIC17.44■□□□□ 0.38
MKS1Q9NXB0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 AC096633.1-201ENST00000422446 749 ntBASIC17.44■□□□□ 0.38
MKS1Q9NXB0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 AC034232.1-201ENST00000506026 1064 ntBASIC17.44■□□□□ 0.38
MKS1Q9NXB0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MKS1Q9NXB0 AC004263.2-201ENST00000617183 678 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms