Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 NUS1P2-201ENST00000417358 873 ntBASIC18.86■□□□□ 0.61
CISHQ9NSE2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 KRT18P56-201ENST00000507275 550 ntBASIC18.86■□□□□ 0.61
CISHQ9NSE2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 AC138932.1-201ENST00000534164 6830 ntBASIC18.86■□□□□ 0.61
CISHQ9NSE2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CISHQ9NSE2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CISHQ9NSE2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CISHQ9NSE2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CISHQ9NSE2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CISHQ9NSE2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CISHQ9NSE2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 AC019129.2-201ENST00000609837 1235 ntBASIC18.85■□□□□ 0.61
CISHQ9NSE2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CISHQ9NSE2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.85■□□□□ 0.61
CISHQ9NSE2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CISHQ9NSE2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CISHQ9NSE2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CISHQ9NSE2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CISHQ9NSE2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CISHQ9NSE2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CISHQ9NSE2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CISHQ9NSE2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CISHQ9NSE2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 MIR5100-201ENST00000579544 119 ntBASIC18.84■□□□□ 0.61
CISHQ9NSE2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 CLEC4GP1-201ENST00000596555 870 ntBASIC18.84■□□□□ 0.61
CISHQ9NSE2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CISHQ9NSE2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 AL049757.1-201ENST00000616842 1596 ntBASIC18.84■□□□□ 0.61
CISHQ9NSE2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CISHQ9NSE2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CISHQ9NSE2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CISHQ9NSE2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CISHQ9NSE2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.83■□□□□ 0.61
CISHQ9NSE2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.83■□□□□ 0.61
CISHQ9NSE2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CISHQ9NSE2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CISHQ9NSE2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CISHQ9NSE2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CISHQ9NSE2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CISHQ9NSE2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 AC103564.2-201ENST00000432853 1299 ntBASIC18.83■□□□□ 0.6
CISHQ9NSE2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 KRT16P4-201ENST00000453883 522 ntBASIC18.83■□□□□ 0.6
CISHQ9NSE2 AC002558.1-201ENST00000488906 803 ntBASIC18.83■□□□□ 0.6
CISHQ9NSE2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 PRELID1P1-202ENST00000567272 903 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms