Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIPK3Q9H422 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIPK3Q9H422 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIPK3Q9H422 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
HIPK3Q9H422 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.25■□□□□ 0.67
HIPK3Q9H422 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HIPK3Q9H422 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIPK3Q9H422 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HIPK3Q9H422 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIPK3Q9H422 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIPK3Q9H422 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIPK3Q9H422 AC126763.1-201ENST00000552015 2118 ntBASIC19.24■□□□□ 0.67
HIPK3Q9H422 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIPK3Q9H422 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIPK3Q9H422 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 AC109462.3-201ENST00000573934 613 ntBASIC19.24■□□□□ 0.67
HIPK3Q9H422 OR7E47P-204ENST00000575924 449 ntBASIC19.24■□□□□ 0.67
HIPK3Q9H422 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 AC023141.13-201ENST00000604991 943 ntBASIC19.24■□□□□ 0.67
HIPK3Q9H422 AC007064.4-201ENST00000637740 555 ntBASIC19.24■□□□□ 0.67
HIPK3Q9H422 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIPK3Q9H422 AC097637.2-201ENST00000624096 1997 ntBASIC19.24■□□□□ 0.67
HIPK3Q9H422 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIPK3Q9H422 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.24■□□□□ 0.67
HIPK3Q9H422 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIPK3Q9H422 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIPK3Q9H422 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.23■□□□□ 0.67
HIPK3Q9H422 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK3Q9H422 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.23■□□□□ 0.67
HIPK3Q9H422 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK3Q9H422 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK3Q9H422 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.23■□□□□ 0.67
HIPK3Q9H422 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.23■□□□□ 0.67
HIPK3Q9H422 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.23■□□□□ 0.67
HIPK3Q9H422 BCRP1-201ENST00000444246 691 ntBASIC19.23■□□□□ 0.67
HIPK3Q9H422 STK19B-204ENST00000512515 211 ntBASIC19.23■□□□□ 0.67
HIPK3Q9H422 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.23■□□□□ 0.67
HIPK3Q9H422 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK3Q9H422 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK3Q9H422 AL096865.1-201ENST00000606796 927 ntBASIC19.23■□□□□ 0.67
HIPK3Q9H422 AC093512.1-201ENST00000617969 520 ntBASIC19.23■□□□□ 0.67
HIPK3Q9H422 AL513210.1-201ENST00000629608 234 ntBASIC19.23■□□□□ 0.67
HIPK3Q9H422 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.23■□□□□ 0.67
HIPK3Q9H422 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK3Q9H422 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK3Q9H422 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK3Q9H422 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.23■□□□□ 0.67
HIPK3Q9H422 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.23■□□□□ 0.67
HIPK3Q9H422 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK3Q9H422 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.23■□□□□ 0.67
HIPK3Q9H422 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK3Q9H422 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIPK3Q9H422 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 AC116562.4-201ENST00000641316 2276 ntBASIC19.22■□□□□ 0.67
HIPK3Q9H422 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.22■□□□□ 0.67
HIPK3Q9H422 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIPK3Q9H422 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms