Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.3■□□□□ 0.52
RNF38Q9H0F5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 PMS2P1-201ENST00000431037 1228 ntBASIC18.3■□□□□ 0.52
RNF38Q9H0F5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 AC105339.3-201ENST00000560043 636 ntBASIC18.3■□□□□ 0.52
RNF38Q9H0F5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RNF38Q9H0F5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 AL020989.1-201ENST00000422979 469 ntBASIC18.29■□□□□ 0.52
RNF38Q9H0F5 LAGE3P1-201ENST00000425356 484 ntBASIC18.29■□□□□ 0.52
RNF38Q9H0F5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 AC145285.3-201ENST00000564603 959 ntBASIC18.29■□□□□ 0.52
RNF38Q9H0F5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 AC104109.2-201ENST00000602919 1418 ntBASIC18.29■□□□□ 0.52
RNF38Q9H0F5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 ABALON-201ENST00000629058 1903 ntBASIC18.29■□□□□ 0.52
RNF38Q9H0F5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF38Q9H0F5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 POLD2P1-201ENST00000511220 997 ntBASIC18.28■□□□□ 0.52
RNF38Q9H0F5 RNA5SP415-201ENST00000517246 115 ntBASIC18.28■□□□□ 0.52
RNF38Q9H0F5 KRT18P58-201ENST00000527480 1120 ntBASIC18.28■□□□□ 0.52
RNF38Q9H0F5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.28■□□□□ 0.52
RNF38Q9H0F5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 AC023511.2-201ENST00000618803 211 ntBASIC18.28■□□□□ 0.52
RNF38Q9H0F5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 ZNF259P1-201ENST00000407656 1365 ntBASIC18.28■□□□□ 0.52
RNF38Q9H0F5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF38Q9H0F5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms